Developing a cost-effective, benchtop DNA synthesizer for educational and demonstration purposes

Backed by Tony Fujii
Novacode Labs
Germany
BiologyChemistry
$205
Raised of $7,305 Goal
3%
Ended on 10/16/25
Campaign Ended
  • $205
    pledged
  • 3%
    funded
  • Finished
    on 10/16/25

About This Project

Hands-on DNA synthesis is inaccessible outside advanced labs. We hypothesize that a safe, low-cost DNA printer using terminal deoxynucleotidyl transferase (TdT) can replicate the stepwise assembly of sequences with non-functional DNA. I will prototype and test whether the device can reliably produce short polymers to demonstrate synthesis principles. If successful, it will provide an open-source tool for teaching synthetic biology worldwide and may enable alternative DNA sequencing methods.

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What is the context of this research?

This project sits at the intersection of synthetic biology, education, and accessibility. Traditional DNA synthesizers are expensive and complex, limiting hands-on learning to well-funded labs. Our goal is to democratize access by developing a low-cost, open-source DNA synthesizer that replicates core chemical processes safely without producing active genetic material. This device provides students, educators, and independent researchers with a practical tool to understand and experiment with DNA synthesis, fostering innovation and inspiring the next generation of scientists outside traditional institutions.

What is the significance of this project?

This project means making DNA synthesis something everyone can experience firsthand, not just a select few with expensive lab access. It’s about opening the door to learning and discovery by creating a tool that’s affordable, safe, and easy to use. I believe hands-on experience sparks real curiosity and understanding, so this synthesizer can inspire students, hobbyists, and researchers alike to explore synthetic biology in new ways. By breaking down barriers, we’re helping grow a community that can innovate and learn together outside traditional labs.

What are the goals of the project?

The project aims to build a benchtop DNA printer using terminal deoxynucleotidyl transferase (TdT) to assemble short, non-functional DNA polymers. Scientific goals include assessing sequence assembly accuracy by measuring stepwise nucleotide addition, evaluating reproducibility across multiple runs, and comparing results with positive controls (commercially synthesized oligos) and negative controls (no enzyme or nucleotide). Device performance will be characterized using gel electrophoresis and spectrophotometry to quantify polymer length and yield. Key experimental variables, including reaction time, nucleotide concentration, and fluid delivery rate, will be systematically tested to optimize reliability. The device’s output will also be benchmarked against commercial synthesis methods to rigorously evaluate its potential as an educational tool.

Budget

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We rely on the chromatography system to purify our synthesized DNA strands, removing impurities so the final product is clean and reliable for teaching purposes. The spectrophotometer helps us precisely measure nucleotide concentrations, allowing us to monitor and improve synthesis in real time. Gel electrophoresis gives us a clear visual way to check DNA strand length and purity, which is crucial for verifying our results quickly. The core tools like peristaltic pumps, solenoid valves, and microcontrollers let us automate fluid handling and control reaction timing with high accuracy. For the peristaltic pumps and creation of additional elements we're using the Prusa MK4S 3D printer. Together, these tools empower us to build a trustworthy, affordable DNA synthesizer that anyone can use to explore synthetic biology hands-on.

Endorsed by

Through better and more affordable demomstrations of DNA synthesis I belive we can excit young researchers to join this field as well as give them a better understanding of the technology.

Project Timeline

The project will unfold over 12 months: months 1-3 focus on design and prototyping core hardware; months 4-6 develop and test fluid control and automation software; months 7-9 validate synthesis steps with analytical tools; months 10-12 optimize performance, create educational materials, and prepare for open-source release and crowdfunding outreach.

Sep 01, 2025

Project Launched

Dec 06, 2025

Design & Prototype Software

Apr 04, 2026

Fluid Control & Automation 

Aug 01, 2026

Validation & Synthesis

Sep 05, 2026

Optimization & Release

Meet the Team

Kai Wenzel
Kai Wenzel

Team Bio

I have completed independent projects including plasmid extraction from E. coli, enzymatic DNA assembly experiments, and PCR-based teaching assays. I collaborate with colleagues and friends in molecular biology, biochemistry, and engineering for guidance when needed. Together with an engineer handling device design and 3D printing, and a software developer building automation, we focus on creating an affordable, safe benchtop DNA printer for hands-on synthetic biology education.

Kai Wenzel

I have a background in biotechnology with hands-on experience in DNA synthesis and lab automation. My work focuses on developing affordable, open-source tools to make synthetic biology accessible outside traditional labs. Currently, I’m building a benchtop DNA synthesizer that safely replicates key chemical steps of DNA assembly for education and research. I’m passionate about empowering others to explore genetics through practical, hands-on tools.

Additional Information

DNA synthesis is a core tool in synthetic biology, allowing stepwise assembly of custom DNA sequences. Traditional synthesizers are expensive and complex, restricting hands-on access to well-funded labs. This project uses terminal deoxynucleotidyl transferase (TdT) to safely replicate DNA assembly principles with non-functional polymers, creating a low-cost, benchtop educational printer. By systematically testing sequence accuracy, reproducibility, and device parameters, and benchmarking against commercial oligos, this platform provides a safe, open-source method for students, educators, and independent researchers to learn and explore synthetic biology experimentally.


Project Backers

  • 2Backers
  • 3%Funded
  • $205Total Donations
  • $102.50Average Donation
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