Disrupting cancer cell signaling through drug discovery

Memorial Universirty of Newfoundland
Canada
BiologyMedicine
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About This Project

Most cancer-related deaths are caused by metastasis, the spread of cancer cells to distant tissues. This process depends on signalling proteins activated by the enzyme GGPPS (geranylgeranyl pyrophosphate synthase). Despite this, metastasis remains largely overlooked in drug discovery. We hypothesize that inhibiting GGPPS will preferentially disrupt metastasis-associated signalling, revealing GGPPS as an underexplored anti-metastatic drug target.

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What is the context of this research?

Although GGPPS plays a central role in cancer biology, it has been difficult to target in drug discovery. The human enzyme is large, forms complex assemblies, and has been challenging to study using traditional screening methods. As a result, very few drug programs have been able to explore GGPPS as a therapeutic target, leaving a major gap in the development of treatments that intervene in this pathway. Currently, no clinically relevant inhibitors of human GGPPS exist.

Our lab recently overcame these limitations by engineering a stable, research-friendly version of human GGPPS. This new form of the enzyme allows us to screen molecules more accurately and to grow crystals that reveal how potential inhibitors bind. With this improved version in hand, we now have a rare opportunity to explore a cancer-relevant target that has remained out of reach for most research groups.

What is the significance of this project?

If we can identify molecules that disrupt GGPPS, we open the door to an entirely new strategy for slowing or stopping the spread of cancers. Most treatments and research focus on tumour growth, but far fewer address the signals that allow cancer cells to move, invade, and become deadly. By finding the first drug-like compounds that act on GGPPS, this project could reveal a target that has been largely overlooked in cancer research. Given that an estimated 90% of cancer deaths are due to its spread, this is a large gap in research.

Beyond discovering individual compounds, this work also creates a foundation for future drug development. Any promising inhibitors we find can guide medicinal chemistry, cell-based studies, and eventually more advanced therapeutic approaches. All results will be shared openly, helping other researchers build on our findings and accelerating progress in an area that urgently needs new ideas.

What are the goals of the project?

Once the project is funded, we will begin by using computer-based molecular docking to screen large, curated collections of existing chemical compounds for their ability to bind the cancer-relevant enzyme GGPPS. These compounds are drawn from established databases of approved, experimental, and cancer-associated molecules and are all commercially available for purchase. This computational step allows us to efficiently narrow thousands of possible compounds down to a small set of promising candidates. We will then order approximately 20–30 of these compounds and test whether they bind to GGPPS and inhibit its activity using established biochemical assays. Compounds that show clear inhibition at low micromolar concentrations or better will be prioritized, and the strongest candidate will be examined further to understand how it interacts with GGPPS at the molecular level. All results will be shared openly so others can build on these findings.

Budget

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Compounds: This is averaging a $100 per compound cost. The more compounds we can test the better, so we will be trying to squeeze as many as we can into this budget. Some compounds can be as low as $25 while others as high as $200. All compounds will be purchased through Cedarlane Labs.

Experiment Supplies (chemicals): This includes things like a phosphate release assay kit ($600) as well has various chemicals involved in all aspects of the project, from enzyme expression to x-ray crystallography.

Experiment Supplies (non-chemical): This encompasses various required supplies such as qPCR plates and crystallography plates.

Synchrotron Fee and Costs: High quality enzyme structure require samples be shipped to a synchrotron.

Endorsed by

I am very excited about the project Sean is proposing. As a PhD student, Sean Ezekiel has been studying geranylgeranyl pyrophosphate synthase (GGPPS), focusing on its regulatory mechanisms and on creating mutant forms as research tools. GGPPS is an established cancer target, with significant recent advances in the field. Sean is uniquely qualified to lead this work, given his exceptional aptitude in structural biology techniques. I cannot think of anyone better suited to ensure the success of this promising and valuable project.

Project Timeline

We’ll start by running computer simulations to identify molecules predicted to inhibit GGPPS (Feb-Mar). We’ll then purchase the top hits and measure how each affects the enzyme’s thermal stability (Mar-Apr) and activity (Apr-Jul). Lastly, we’ll attempt to grow crystals of the enzyme–inhibitor complex and determine its 3-D structure (Jul-).

Note: Crystallography is a time-consuming process. The date for the last milestones is a perfect world scenario.

Jan 21, 2026

Project Launched

Mar 01, 2026

Virtual Screening - We will provide images of some of the predicted binding models of compounds we will be purchasing.

Apr 01, 2026

Thermal Stability Testing - This screening method measuring the stability of the enzyme in the presence of a compound. Graphs showing the results will be uploaded.

May 01, 2026

Activity Testing - The big one. The activity of live enzyme is measured with and without a compound. Graphs showing the results will be uploaded.

Jun 01, 2026

Growing Crystals - Crystals of the enzyme bound to a compound is how we are able to visualize a protein structure. We will upload pictures of some crystals.

Meet the Team

Sean Ezekiel
Sean Ezekiel
Ph.D Candidate

Affiliates

Memorial University of Newfoundland, Department of Biochemistry
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Team Bio

This project will be overseen by my Ph.D supervisor, Dr. Jaeok Park. Dr. Park's expertise lies in understanding how enzymes control critical cellular pathways, particularly those relevant to cancer. He brings strategic oversight, technical depth, and will ensure the work is both rigorous and credible. In practical terms, his guidance keeps the project focused, interpretable, and scientifically defensible—so results aren’t just interesting, but meaningful.

Sean Ezekiel

I entered biochemistry later than most, beginning my undergraduate studies at 40 after losing someone close to cancer. That experience reshaped my priorities and pushed me toward research with real-world relevance. Living with a disability resulting from transverse myelitis has also led to a secondary interest in the mechanisms of demyelination and neural repair. I thrive on problem solving and the process of dissecting complex biological systems—treating each project as a puzzle waiting to be understood.

My publications.

My LinkedIn.

Lab Notes

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