Markus Friedrich

Markus Friedrich

Jan 08, 2019

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Ptomaphagus hirtus now at least 5 million years old

Hello there, dear friends of the cave beetle, and happy new year... ! 

Writing this post, I am realizing that 2018 went by without a single update. Not that nothing important happened. As a matter of fact, a brave group of undergraduate students completed the first short-term temperature tolerance experiment series. While yielding quite surprising results, I abstained from posting in the hope of repeating the experiment in due course. But then life and other projects came in the way. And now here we are, 2019, with this project still in the works. So more about that at a later time point.

Today, I am happy to announce that P. hirtus and its closely related friends in the so-called hirtus-group species cluster started the new year with a big bang: The publication of a long-term collaboration with the Zigler lab, which was generous enough to include us in their comprehensive molecular survey of the diversification of the hirtus-group:

Vincent L. Leray, Jason Caravas, Markus Friedrich, Kirk S. Zigler (2019): Mitochondrial sequence data indicate “Vicariance by Erosion” as a mechanism of species diversification in North American Ptomaphagus (Coleoptera, Leiodidae, Cholevinae) cave beetles. Subterranean Biology 29: 35-57

There are many important findings in this paper we are excited about. Most significant for P. hirtus, the molecular clock findings reveal the beloved species to be at least 5 million years of age! Now, while perfectly in the range of European cave beetle ages found by Ignacio Ribera's group with the molecular clock methodology we adopted (Ribera et al. 2010: Ancient origin of a Western Mediterranean radiation of subterranean beetles. BMC Evolutionary Biology 201010:29), 5 million years of age is very different from the 200,000 to 350,000 years estimate fully reasonably developed by Stewart Peck given the available data and tools at the time (Peck 1984: The distribution and evolution of cavernicolous Ptomaphagus beetles in the southeastern United States (Coleoptera; Leiodidae; Cholevinae) with new species and records. Canadian Journal of Zoology 62: 730–40).

Besides the staggering difference of an order of magnitude, the revised P. hirtus age has important functional implications. Most important perhaps, while it was previously reasonable to consider the miniaturized visual system of P. hirtus a transient state on its way towards complete loss, it seems not so likely anymore. This is because of the long time we now have to assume to span between the onset of adaptation to cave life and the existence of its highly regressed, and yet functional, visual system today. It is now more reasonable to hypothesize that P. hirtus [and most of the hirtus-group species] represents an example of long-term preservation of vision in a cave-adapted species, thus raising questions regarding the fitness benefits that sustain the conservation of a minimal visual system in such a case. While we have some ideas here [such as Sonya's finding of the entrainable circadian clock], I'll spare you the details for a time when we published them. Until then, enjoy the new study on the diversification of the entire hirtus-group and share with your friends the news of P. hirtus' ancientness.

Again, happy new year, and thanks for your support which has come a long way.


1 comments

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  • Steven Cooper
    Steven Cooper
    Really interesting result, Marcus, for the age of the lineage, but could its nearest surface relative have gone extinct (e.g. that is likely the case for many of our subterranean dytiscid species)? Extinction of lineages is often a confounding factor in biogeographical studies, particularly in regions that have gone through glaciations or in Australia's case - severe aridity. cheers, Steve
    Jan 13, 2019
  • Markus Friedrich
    Markus FriedrichResearcher
    Hi there Steve! Great point of course. The number of 5 million years as the age of P. hirtus age is indeed based on the simplifying assumption that there were no further, now extinct lineages that branched off the terminal branch to P. hirtus in our tree. A more careful statement would be that our tree times the origin of the last common ancestor that gave rise to modern P. hirtus plus possibly extinct relatives in relation to the other members of the hirtus-group. While the paleontological evidence is, to the best of my knowledge, too limited to explore this, we are hopeful to get further insights some day by timing the onset of gene degeneration related to cave colonization and adaptation, which be great to compare to the subterranean dytiscids and other subterranean clades.
    Jan 14, 2019
  • Steven Cooper
    Steven Cooper
    That's a great idea, Markus- we need to find a nice way of calibrating the neutral mutation rate of gene degeneration, or even it's relative rate compared to other markers like COI, then we could make some nice estimates on timing the onset of cave colonisation. Are there any genes that are potentially showing degeneration in P. hirtus? Steve
    Jan 16, 2019
  • Markus Friedrich
    Markus FriedrichResearcher
    Genes potentially showing degeneration in P. hirtus: For this, we would need the genome sequence... which we've asked to be funded quite a number of times in the past (Hello NSF!). And comparative transcriptomes from surface relatives. Based on the transcriptome data we published in 2011 (doi: 10.1242/jeb.060368), I would think the eye pigmentation genes we couldn't detect to be expressed represent candidates for genes in the process of degeneration.
    Jan 18, 2019

About This Project

My undergraduate student Sonya Royzenblat and I will track the well being of the cave beetle Ptomaphagus hirtus at different ambient temperatures to determine the temperature range at which this species can be cultured most efficiently. Besides boosting our studies of its enigmatic visual system in the lab, this insight will help to understand its dispersal limits in the cave environment, and to predict possible changes in response to global warming.

Blast off!

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